Term: sample name (samp_name)

A local identifier or name that for the material sample used for extracting nucleic acids, and subsequent sequencing. It can refer either to the original material collected or to any derived sub-samples. It can have any format, but we suggest that you make it concise, unique and consistent within your lab, and as informative as possible. INSDC requires every sample name from a single Submitter to be unique. Use of a globally unique identifier for the field source_mat_id is recommended in addition to sample_name

URI: MIXS:0001107

Applicable Checklists and Extensions

NOTE: does not include Combinations (of checklists and extensions) that use samp_name.

Name	Description	Checklist/Extension
HostAssociated	A collection of terms appropriate when collecting samples and sequencing samp...	Extension
Soil	A collection of terms appropriate when collecting samples and sequencing samp...	Extension
Misag	Minimum Information About a Single Amplified Genome	Checklist
Water	A collection of terms appropriate when collecting samples and sequencing wate...	Extension
FoodAnimalAndAnimalFeed	A collection of terms appropriate when collecting samples and performing sequ...	Extension
FoodHumanFoods	A collection of terms appropriate when collecting samples and performing sequ...	Extension
FoodFarmEnvironment	A collection of terms appropriate when collecting samples and performing sequ...	Extension
Miuvig	Minimum Information About an Uncultivated Virus Genome	Checklist
Sediment	A collection of terms appropriate when collecting samples and sequencing samp...	Extension
MiscellaneousNaturalOrArtificialEnvironment	A collection of generic terms appropriate when collecting and sequencing samp...	Extension
MigsBa	Minimal Information about a Genome Sequence: cultured bacteria/archaea	Checklist
Mimag	Minimum Information About a Metagenome-Assembled Genome	Checklist
MigsOrg	Minimal Information about a Genome Sequence: organelle	Checklist
FoodFoodProductionFacility	A collection of terms appropriate when collecting samples and performing sequ...	Extension
HumanGut	A collection of terms appropriate when collecting samples and sequencing samp...	Extension
SymbiontAssociated	A collection of terms appropriate when collecting samples and sequencing samp...	Extension
MimarksC	Minimal Information about a Marker Specimen: specimen	Checklist
HumanSkin	A collection of terms appropriate when collecting samples and sequencing samp...	Extension
MigsEu	Minimal Information about a Genome Sequence: eukaryote	Checklist
HumanOral	A collection of terms appropriate when collecting samples and sequencing samp...	Extension
Air	A collection of terms appropriate when collecting and sequencing samples obta...	Extension
HydrocarbonResourcesCores	A collection of terms appropriate when collecting samples and sequencing samp...	Extension
PlantAssociated	A collection of terms appropriate when collecting samples and sequencing samp...	Extension
HumanAssociated	A collection of terms appropriate when collecting samples and sequencing samp...	Extension
MimarksS	Minimal Information about a Marker Specimen: survey	Checklist
Mims	Metagenome or Environmental	Checklist
WastewaterSludge	A collection of terms appropriate when collecting samples and sequencing samp...	Extension
MicrobialMatBiofilm	A collection of terms appropriate when collecting samples and sequencing samp...	Extension
BuiltEnvironment	A collection of terms appropriate when collecting samples and sequencing samp...	Extension
HydrocarbonResourcesFluidsSwabs	A collection of terms appropriate when collecting samples and sequencing samp...	Extension
MigsVi	Minimal Information about a Genome Sequence: virus	Checklist
HumanVaginal	A collection of terms appropriate when collecting samples and sequencing samp...	Extension
MigsPl	Minimal Information about a Genome Sequence: plasmid	Checklist

Properties

• Range: String
• Cardinality: 1..1

Examples

Value
ISDsoil1

LinkML Source

name: samp_name
annotations:
  Preferred_unit:
    tag: Preferred_unit
    value: ''
description: A local identifier or name that for the material sample used for extracting
  nucleic acids, and subsequent sequencing. It can refer either to the original material
  collected or to any derived sub-samples. It can have any format, but we suggest
  that you make it concise, unique and consistent within your lab, and as informative
  as possible. INSDC requires every sample name from a single Submitter to be unique.
  Use of a globally unique identifier for the field source_mat_id is recommended in
  addition to sample_name
title: sample name
examples:
- value: ISDsoil1
in_subset:
- investigation
from_schema: https://w3id.org/mixs
keywords:
- sample
slot_uri: MIXS:0001107
alias: samp_name
domain_of:
- MigsBa
- MigsEu
- MigsOrg
- MigsPl
- MigsVi
- Mimag
- MimarksC
- MimarksS
- Mims
- Misag
- Miuvig
- Air
- BuiltEnvironment
- FoodAnimalAndAnimalFeed
- FoodFarmEnvironment
- FoodFoodProductionFacility
- FoodHumanFoods
- HostAssociated
- HumanAssociated
- HumanGut
- HumanOral
- HumanSkin
- HumanVaginal
- HydrocarbonResourcesCores
- HydrocarbonResourcesFluidsSwabs
- MicrobialMatBiofilm
- MiscellaneousNaturalOrArtificialEnvironment
- PlantAssociated
- Sediment
- Soil
- SymbiontAssociated
- WastewaterSludge
- Water
range: string
required: true